Jatropha Genome Database

JcCB0030731.10 (JcS_101502.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0030731
Scaffold:
JcS_101502 JcCA0102601(+) =JcCB0632131(-) =JcCB0088201(+) =JcCB0030731(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SEL0_RICCO 481 67.7 76.9 (tr|B9SEL0) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0969830 PE=4 SV=1
Arabidopsis_pep AT5G24470.1 263 61.1 70.1 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 5); transcription regulator/ two-component response regulator | chr5:8356204-8358873 REVERSE
soybean_pep Glyma04g40640.1 403 57.6 67.2  
Medicago_pep IMGA|Medtr3g122660.2 350 51.9 64.9 Response regulator receiver chr03_pseudomolecule_IMGAG_V3 30551992-30549295 E EGN_Mt090430 20090702
grape_pep GSVIVT01038647001 401 57.3 68.3  
castor_bean_cds 29866.m000621 285 89.5 89.5 conserved hypothetical protein
castor_bean_pep 29866.m000621 481 67.7 76.9 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c11540 642 93.1 93.1  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0030731.10 length: 408 aa.
IPR001789 Signal transduction response regulator, receiver domain
method AccNumber shortName E-value location
Molecular Function GO:0000156 two-component response regulator activity    
Biological Process GO:0000160 two-component signal transduction system (phosphorelay)    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF00072 Response_reg 1.5e-15 66-191
HMMSmart SM00448 no description 8.1e-19 64-193
ProfileScan PS50110 RESPONSE_REGULATORY 22.998 65-197
IPR011006 CheY-like
superfamily SSF52172 CheY-like 2e-23 64-198
no_ID  
Coil coil coiled-coil NA 6-34
Gene3D G3DSA:3.40.50.2300 no description 4.3e-20 64-197
HMMPanther PTHR23283 SENSOR 2.3e-09 6-201
HMMPanther PTHR23283:SF49 TWO-COMPONENT 2.3e-09 6-201
Seg seg seg NA 9-34