Jatropha Genome Database

JcCB0026731.10 (JcS_202655.10)

Related links:

GeneModel

Predicted Sequence Links:

Genome Sequence: JcCB0026731

Full length sequence(10217 bp)
Sequence Cut

Init: Term:
reverse complement

Scaffold:

JcS_202655

JcCD0107148(-) =JcCB0026731(+)

Results of Blast2 searches (The best-hits are tabulated.):

database	Accession	Score	Iden (%)	Posi (%)	Definition
trembl	B9RHW4_RICCO	472	62.5	75.5	(tr\|B9RHW4) Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1574180 PE=3 SV=1
Arabidopsis_pep	AT3G26210.1	269	40.0	58.4	\| Symbols: CYP71B23 \| CYP71B23; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding \| chr3:9593329-9595202 REVERSE
soybean_pep	Glyma07g20430.1	348	46.9	64.5
Medicago_pep	IMGA\|Medtr5g081440.1	347	46.7	66.9	Cytochrome P450 chr05_pseudomolecule_IMGAG_V3 30591236-30589378 E EGN_Mt090430 20090702
grape_pep	GSVIVT01037975001	332	44.5	63.9
castor_bean_cds	30169.m006275	151	78.2	78.2	cytochrome P450, putative
castor_bean_pep	30169.m006275	472	62.5	75.5	cytochrome P450, putative
JAT_13201ests	gi\|237679862\|gb\|GO247167.1\|GO247167	1197	99.7	99.7	JcrME_RL0711 Expressed sequence tags from Jatropha curcas root cDNA library Jatropha curcas cDNA, mRNA sequence
KJC_r1	KJC_c02434	1558	99.0	99.0

A list of protein families, domains and functional sites (searches in InterPro)

IPR001128	Cytochrome P450
JcCB0026731.10				length: 365 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0004497	monooxygenase activity
Molecular Function	GO:0005506	iron ion binding
Molecular Function	GO:0009055	electron carrier activity
Molecular Function	GO:0020037	heme binding
Gene3D	G3DSA:1.10.630.10	no description	1.9e-92	2-365
HMMPanther	PTHR19383	CYTOCHROME	2e-145	1-327
HMMPfam	PF00067	p450	1.7e-77	7-344
superfamily	SSF48264	Cytochrome	6e-97	1-362
IPR002401	Cytochrome P450, E-class, group I
Molecular Function	GO:0004497	monooxygenase activity
Molecular Function	GO:0005506	iron ion binding
Molecular Function	GO:0020037	heme binding
Biological Process	GO:0055114	oxidation reduction
FPrintScan	PR00463	EP450I	2.2e-34	157-174 177-203 220-238 260-284 296-306 306-329
IPR017972	Cytochrome P450, conserved site
PatternScan	PS00086	CYTOCHROME_P450	NA	299-308
IPR017973	Cytochrome P450, C-terminal
FPrintScan	PR00385	P450	2.5e-12	168-185 221-232 297-306 306-317
no_ID
Coil	coil	coiled-coil	NA	191-212
HMMPanther	PTHR19383:SF170CYTOCHROME	P450,	2e-145	1-327
Seg	seg	seg	NA	65-81 134-143