Jatropha Genome Database

JcCB0025591.20 (JcS_109189.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0025591
Scaffold:
JcS_109189 JcCB0025591(-) =JcCB0148211(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SJ49_RICCO 968 88.0 90.0 (tr|B9SJ49) Auxin efflux carrier component, putative OS=Ricinus communis GN=RCOM_0843030 PE=4 SV=1
Arabidopsis_pep AT1G70940.1 798 76.1 81.3 | Symbols: PIN3, ATPIN3 | PIN3 (PIN-FORMED 3); auxin:hydrogen symporter/ transporter | chr1:26743170-26745871 FORWARD
soybean_pep Glyma20g01760.1 808 73.4 78.2  
Medicago_pep IMGA|Medtr6g083450.1 602 59.6 69.6 Auxin Efflux Carrier chr06_pseudomolecule_IMGAG_V3 16997249-16991738 E EGN_Mt090430 20090702
grape_pep GSVIVT01025749001 538 55.6 64.0  
castor_bean_cds 29816.m000677 696 83.8 83.8 Auxin efflux carrier component, putative
castor_bean_pep 29816.m000677 968 88.0 90.0 Auxin efflux carrier component, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c00643 2034 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0025591.20 length: 548 aa.
IPR004776 Auxin efflux carrier
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF03547 Mem_trans 1.1e-33 9-242
327-548
IPR014024 Auxin efflux carrier, subgroup
HMMTigr TIGR00946 2a69: 6.5e-233 1-548
no_ID  
Seg seg seg NA 341-358
437-450