Jatropha Genome Database

JcCB0018211.10 (JcS_104640.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0018211
Scaffold:
JcS_104640 JcCB0361311(+) =JcCB0018211(+) =JcCB0342871(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B3SRP2_MANES 541 72.7 78.6 (tr|B3SRP2) Starch synthase isoform I OS=Manihot esculenta GN=SSI PE=2 SV=1
Arabidopsis_pep AT5G24300.1 442 66.9 77.3 | Symbols: SSI1, SSI, ATSS1 | SSI1 (SUPPRESSOR OF SALICYLIC ACID INSENSITIVITY 1); starch synthase/ transferase, transferring glycosyl groups | chr5:8266934-8270860 FORWARD
soybean_pep Glyma06g13480.1 479 74.7 84.2  
Medicago_pep IMGA|Medtr3g123800.1 445 70.2 78.6 Glycosyl transferase, group 1; N-6 Adenine-specific DNA methylase chr03_pseudomolecule_IMGAG_V3 31238660-31231370 E EGN_Mt090430 20090702
grape_pep GSVIVT01038557001 458 72.4 83.8  
castor_bean_cds 30024.m001701 69.9 93.6 93.6 conserved hypothetical protein
castor_bean_pep 28838.m000254 172 42.5 55.8 starch synthase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0018211.10 length: 374 aa.
IPR013534 Starch synthase, catalytic domain
method AccNumber shortName E-value location
HMMPfam PF08323 Glyco_transf_5 2.1e-59 137-374
no_ID  
HMMPanther PTHR12526 GLYCOSYLTRANSFERASE 2.2e-58 136-374
HMMPanther PTHR12526:SF17 STARCH 2.2e-58 136-374
Seg seg seg NA 67-78
superfamily SSF53756 UDP-Glycosyltransferase/glycogen 1.3e-25 137-374