Jatropha Genome Database

JcCB0013521.20 (JcS_100044.70)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0013521
Scaffold:
JcS_100044 JcCB0760911(+) =JcCB0892281(+) =JcPR03BRZWZ(+) =JcCA0279321(+) =JcCA0259681(-) =JcCB0434201(-) =JcCB0411911(+) =JcCA0128121(-) =JcCB0013521(-) =JcCB0463071(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9T1D1_RICCO 867 86.8 90.9 (tr|B9T1D1) Alanine-glyoxylate aminotransferase, putative OS=Ricinus communis GN=RCOM_0193980 PE=3 SV=1
Arabidopsis_pep AT4G39660.1 821 81.4 89.1 | Symbols: AGT2 | AGT2 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 2); alanine-glyoxylate transaminase/ catalytic/ pyridoxal phosphate binding / transaminase | chr4:18406797-18409262 FORWARD
soybean_pep Glyma08g14850.1 800 86.1 95.1  
Medicago_pep IMGA|Medtr4g140630.1 807 87.7 95.6 Peptidase S1 and S6, chymotrypsin/Hap; Aminotransferase class-III; chr04_pseudomolecule_IMGAG_V3 34556847-34553328 F EGN_Mt090430 20090702
grape_pep GSVIVT01022201001 827 90.0 97.4  
castor_bean_cds 28196.m000210 1477 89.7 89.7 alanine-glyoxylate aminotransferase, putative
castor_bean_pep 28196.m000210 867 86.8 90.9 alanine-glyoxylate aminotransferase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c00617 2859 99.9 99.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0013521.20 length: 485 aa.
IPR005814 Aminotransferase class-III
method AccNumber shortName E-value location
Molecular Function GO:0008483 transaminase activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPanther PTHR11986 AMINOTRANSFERASE 3.5e-239 77-485
HMMPfam PF00202 Aminotran_3 5.8e-81 90-421
PatternScan PS00600 AA_TRANSFER_CLASS_3 NA 296-334
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 8.2e-70 122-379
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
superfamily SSF53383 PLP-dependent 1.9e-122 64-485
no_ID  
HMMPanther PTHR11986:SF23 ALANINE-GLYOXYLATE 3.5e-239 77-485
Seg seg seg NA 29-54