Jatropha Genome Database

JcCB0010841.10 (JcS_111299.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0010841
Scaffold:
JcS_111299 JcCB0070021(-) =JcCB0010841(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SMA0_RICCO 248 58.9 67.6 (tr|B9SMA0) Shikimate kinase, chloroplast, putative OS=Ricinus communis GN=RCOM_0297460 PE=3 SV=1
Arabidopsis_pep AT2G21940.4 164 44.9 60.5 | Symbols: | shikimate kinase, putative | chr2:9351106-9352881 FORWARD
soybean_pep Glyma08g14980.1 188 42.4 61.1  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01013668001 240 53.9 66.1  
castor_bean_cds 28644.m000929 194 79.0 79.0 Shikimate kinase, chloroplast precursor, putative
castor_bean_pep 28644.m000929 248 58.9 67.6 Shikimate kinase, chloroplast precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0010841.10 length: 285 aa.
IPR000623 Shikimate kinase
method AccNumber shortName E-value location
Molecular Function GO:0004765 shikimate kinase activity    
Molecular Function GO:0005524 ATP binding    
FPrintScan PR01100 SHIKIMTKNASE 4.2e-17 72-87
150-159
170-187
HAMAP MF_00109 AROK_MF_00109 20.733 70-249
HMMPfam PF01202 SKI 7.1e-33 78-233
PatternScan PS01128 SHIKIMATE_KINASE NA 133-158
no_ID  
Gene3D G3DSA:3.40.50.300 no description 3.6e-34 71-247
HMMPanther PTHR21087 SHIKIMATE 7.4e-55 48-256
Seg seg seg NA 5-23
76-87
146-162
superfamily SSF52540 P-loop 2.2e-23 68-260