Jatropha Genome Database

JcCB0010811.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0010811
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9S1N2_RICCO 492 55.1 68.6 (tr|B9S1N2) Casbene synthase, chloroplast, putative OS=Ricinus communis GN=RCOM_0866620 PE=4 SV=1
Arabidopsis_pep AT3G14520.1 297 35.7 55.6 | Symbols: | terpene synthase/cyclase family protein | chr3:4875868-4878243 REVERSE
soybean_pep Glyma12g16990.1 285 36.6 55.4  
Medicago_pep IMGA|Medtr5g081360.1 286 36.4 56.8 Terpene synthase-like; Terpenoid synthase chr05_pseudomolecule_IMGAG_V3 30559952-30563990 E EGN_Mt090430 20090702
grape_pep GSVIVT01014569001 325 37.6 56.8  
castor_bean_cds 29827.m002614 137 83.7 83.7 Casbene synthase, chloroplast precursor, putative
castor_bean_pep 29827.m002614 492 55.1 68.6 Casbene synthase, chloroplast precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0010811.10 length: 497 aa.
IPR001906 Terpene synthase-like
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF01397 Terpene_synth 5.2e-54 46-210
IPR005630 Terpene synthase, metal-binding domain
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF03936 Terpene_synth_C 6.8e-65 242-466
IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
superfamily SSF48239 Terpenoid 4.9e-61 32-233
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 1.1e-74 201-466
superfamily SSF48576 Terpenoid 1.5e-78 238-466
no_ID  
Coil coil coiled-coil NA 50-71
Seg seg seg NA 39-48
55-65
252-264
484-497