Jatropha Genome Database

JcCB0009671.20 (JcS_104724.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0009671
Scaffold:
JcS_104724 JcCB0386201(-) =JcCB0009671(-) =JcCB0418811(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RVC9_RICCO 616 84.4 90.4 (tr|B9RVC9) Homoserine kinase, putative OS=Ricinus communis GN=RCOM_0902180 PE=3 SV=1
Arabidopsis_pep AT2G17265.1 475 70.4 79.1 | Symbols: HSK | HSK (HOMOSERINE KINASE); homoserine kinase | chr2:7508606-7509718 FORWARD
soybean_pep Glyma14g00340.1 486 70.1 81.4  
Medicago_pep IMGA|Medtr5g106780.1 478 67.9 77.9 Homoserine kinase; chr05_pseudomolecule_IMGAG_V3 43022538-43025033 E EGN_Mt090430 20090702
grape_pep GSVIVT01023624001 409 61.5 71.0  
castor_bean_cds 29841.m002921 581 82.2 82.2 homoserine kinase, putative
castor_bean_pep 29841.m002921 616 84.4 90.4 homoserine kinase, putative
JAT_13201ests gi|262091051|gb|GT228478.1|GT228478 359 97.1 97.1 JC043 Jatropha seeds from fruits at three stages of maturation Jatropha curcas cDNA clone Contig43 5', mRNA sequence
KJC_r1 KJC_c07578 523 88.2 88.2  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0009671.20 length: 366 aa.
IPR000870 Homoserine kinase
method AccNumber shortName E-value location
Molecular Function GO:0004413 homoserine kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006566 threonine metabolic process    
FPrintScan PR00958 HOMSERKINASE 5.1e-30 55-70
146-161
185-198
225-242
305-320
HMMPIR PIRSF000676 Homoserine 9.8e-94 46-363
HMMTigr TIGR00191 thrB: 1.8e-57 48-363
IPR006203 GHMP kinase, ATP-binding, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00627 GHMP_KINASES_ATP NA 139-150
IPR006204 GHMP kinase
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016301 kinase activity    
Biological Process GO:0016310 phosphorylation    
HMMPfam PF00288 GHMP_kinases_N 4.4e-13 133-198
IPR013750 GHMP kinase, C-terminal
HMMPfam PF08544 GHMP_kinases_C 1.8e-10 263-338
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
Gene3D G3DSA:3.30.230.10 no description 6.2e-20 46-163
IPR020568 Ribosomal protein S5 domain 2-type fold
superfamily SSF54211 Ribosomal 1e-31 46-216
no_ID  
Gene3D G3DSA:1.10.8.90 no description 4.7e-07 164-216
HAMAP MF_00384 KHSE_MF_00384 28.800 48-360
HMMPanther PTHR20861 HOMOSERINE/4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL 5.1e-75 88-363
HMMPanther PTHR20861:SF1 HOMOSERINE 5.1e-75 88-363
Seg seg seg NA 147-159
superfamily SSF55060 GHMP 8.9e-32 219-340