Jatropha Genome Database

JcCB0009491.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0009491
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9I5I1_POPTR 508 59.5 73.5 (tr|B9I5I1) Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_243072 PE=4 SV=1
Arabidopsis_pep AT5G23960.1 341 41.7 61.1 | Symbols: ATTPS21, TPS21 | TPS21 (TERPENE SYNTHASE 21); (-)-E-beta-caryophyllene synthase/ alpha-humulene synthase | chr5:8092969-8095128 FORWARD
soybean_pep Glyma12g16990.1 311 39.5 60.2  
Medicago_pep IMGA|Medtr5g081450.1 337 40.7 62.6 Terpene synthase-like; Terpenoid synthase chr05_pseudomolecule_IMGAG_V3 30599999-30603716 E EGN_Mt090430 20090702
grape_pep GSVIVT01014569001 368 43.7 62.5  
castor_bean_cds 30065.m001152 87.7 82.1 82.1 Casbene synthase, chloroplast precursor, putative
castor_bean_pep 30169.m006314 473 53.9 71.5 Casbene synthase, chloroplast precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0009491.10 length: 488 aa.
IPR001906 Terpene synthase-like
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF01397 Terpene_synth 6.9e-22 67-139
IPR005630 Terpene synthase, metal-binding domain
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF03936 Terpene_synth_C 1.3e-76 169-432
IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
superfamily SSF48239 Terpenoid 5.2e-31 63-164
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 1.6e-111 143-486
superfamily SSF48576 Terpenoid 2.6e-109 165-486