Jatropha Genome Database

JcCB0003261.20 (JcS_100099.60)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0003261
Scaffold:
JcS_100099 JcCB0837721(+) =JcCB0279501(+) =JcCB0172651(-) =JcCB0454891(-) =JcCB0101331(-) =JcCB0003261(-) =JcCB0359161(-) =JcCB0286011(-) =JcCB0143411(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9MXD6_POPTR 695 78.9 82.9 (tr|B9MXD6) 3-dehydroquinate synthase OS=Populus trichocarpa GN=DHQS6|DHQS7 PE=3 SV=1
Arabidopsis_pep AT5G66120.2 637 79.5 88.2 | Symbols: | 3-dehydroquinate synthase, putative | chr5:26431516-26433649 REVERSE
soybean_pep Glyma11g08350.1 657 82.6 89.2  
Medicago_pep IMGA|Medtr5g022480.1 637 80.9 86.5 3-dehydroquinate synthase chr05_pseudomolecule_IMGAG_V3 8765278-8769736 F EGN_Mt090430 20090702
grape_pep GSVIVT01018732001 669 76.3 82.4  
castor_bean_cds 29656.m000470 793 87.4 87.4 3-dehydroquinate synthase, putative
castor_bean_pep 29656.m000470 547 82.8 88.2 3-dehydroquinate synthase, putative
JAT_13201ests gi|268520137|gb|FM889985.1|FM889985 559 98.7 98.7 FM889985 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003752, mRNA sequence
KJC_r1 KJC_c10057 773 99.7 99.7  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0003261.20 length: 441 aa.
IPR002658 3-dehydroquinate synthase AroB
method AccNumber shortName E-value location
Molecular Function GO:0003856 3-dehydroquinate synthase activity    
Biological Process GO:0009073 aromatic amino acid family biosynthetic process    
HMMPanther PTHR21090:SF1 3-DEHYDROQUINATE 7.3e-161 86-440
HMMPfam PF01761 DHQ_synthase 5.2e-119 93-403
IPR016037 3-dehydroquinate synthase AroB, subgroup
Molecular Function GO:0003856 3-dehydroquinate synthase activity    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0009073 aromatic amino acid family biosynthetic process    
HAMAP MF_00110 AROB_MF_00110 42.274 78-437
HMMTigr TIGR01357 aroB: 1.1e-151 89-436
no_ID  
Gene3D G3DSA:1.20.1090.10 no description 1.1e-59 251-424
Gene3D G3DSA:3.40.50.1970 no description 2.7e-59 75-250
HMMPanther PTHR21090 AROM/DEHYDROQUINATE 7.3e-161 86-440
Seg seg seg NA 51-62
345-356
406-418
superfamily SSF56796 Dehydroquinate 7.3e-121 78-437