Jatropha Genome Database

JcCB0001131.20

Related links:

GeneModel

Predicted Sequence Links:

Genome Sequence: JcCB0001131

Full length sequence(19181 bp)
Sequence Cut

Init: Term:
reverse complement

Scaffold:

No data.

Results of Blast2 searches (The best-hits are tabulated.):

database	Accession	Score	Iden (%)	Posi (%)	Definition
trembl	B9R9J6_RICCO	1065	90.7	95.6	(tr\|B9R9J6) Phosphoglucomutase, putative OS=Ricinus communis GN=RCOM_1498100 PE=3 SV=1
Arabidopsis_pep	AT5G51820.1	1016	87.3	93.7	\| Symbols: PGM, ATPGMP, PGM1, STF1 \| PGM (PHOSPHOGLUCOMUTASE); phosphoglucomutase \| chr5:21063531-21067933 REVERSE
soybean_pep	Glyma10g38590.1	1032	87.9	94.8
Medicago_pep	IMGA\|Medtr1g129920.2	1018	87.1	92.7	Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II chr01_pseudomolecule_IMGAG_V3 29112700-29119131 E EGN_Mt090430 20090702
grape_pep	GSVIVT01018452001	1023	88.6	93.9
castor_bean_cds	30147.m014138	1865	88.7	88.7	phosphoglucomutase, putative
castor_bean_pep	30147.m014138	1065	90.7	95.6	phosphoglucomutase, putative
JAT_13201ests	--No_Hits--
KJC_r1	KJC_c02761	60.0	81.1	81.1

A list of protein families, domains and functional sites (searches in InterPro)

IPR005841	Alpha-D-phosphohexomutase, N-terminal
JcCB0001131.20				length: 572 aa.
method	AccNumber	shortName	E-value	location
Biological Process	GO:0005975	carbohydrate metabolic process
Molecular Function	GO:0016868	intramolecular transferase activity, phosphotransferases
FPrintScan	PR00509	PGMPMM	2e-21	123-137 223-242 259-272 288-303
IPR005843	Alpha-D-phosphohexomutase, C-terminal
Biological Process	GO:0005975	carbohydrate metabolic process
Molecular Function	GO:0016868	intramolecular transferase activity, phosphotransferases
HMMPfam	PF00408	PGM_PMM_IV	5.2e-09	495-547
IPR005844	Alpha-D-phosphohexomutase, alpha/beta/alpha domain I
Biological Process	GO:0005975	carbohydrate metabolic process
Molecular Function	GO:0016868	intramolecular transferase activity, phosphotransferases
HMMPfam	PF02878	PGM_PMM_I	2.1e-36	29-169
IPR005845	Alpha-D-phosphohexomutase, alpha/beta/alpha domain II
Biological Process	GO:0005975	carbohydrate metabolic process
Molecular Function	GO:0016868	intramolecular transferase activity, phosphotransferases
HMMPfam	PF02879	PGM_PMM_II	2.1e-13	201-304
IPR005846	Alpha-D-phosphohexomutase, alpha/beta/alpha domain III
Biological Process	GO:0005975	carbohydrate metabolic process
Molecular Function	GO:0016868	intramolecular transferase activity, phosphotransferases
HMMPfam	PF02880	PGM_PMM_III	7.1e-27	313-435
IPR016055	Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III
Biological Process	GO:0005975	carbohydrate metabolic process
Molecular Function	GO:0016868	intramolecular transferase activity, phosphotransferases
Gene3D	G3DSA:3.40.120.10	no description	6e-38	11-205 206-308 308-407
superfamily	SSF53738	Phosphoglucomutase,	6.6e-40	13-230 296-442
IPR016066	Alpha-D-phosphohexomutase, conserved site
Molecular Function	GO:0000287	magnesium ion binding
PatternScan	PS00710	PGM_PMM	NA	124-133
no_ID
Gene3D	G3DSA:3.30.310.50	no description	2.6e-60	417-572
HMMPanther	PTHR22573	PHOSPHOHEXOMUTASE	6.9e-216	16-389
HMMPanther	PTHR22573:SF5	PHOSPHOGLUCOMUTASE	6.9e-216	16-389
Seg	seg	seg	NA	83-92
superfamily	SSF55957	Phosphoglucomutase,	5.1e-53	437-572