Jatropha Genome Database

JcCB0000571.20 (JcS_107805.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0000571
Scaffold:
JcS_107805 JcCA0043871(+) =JcCB0000571(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9HZW3_POPTR 219 37.2 53.7 (tr|B9HZW3) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_568920 PE=4 SV=1
Arabidopsis_pep AT4G12560.2 106 26.6 45.9 | Symbols: | F-box family protein | chr4:7441815-7443157 FORWARD
soybean_pep Glyma16g06880.1 129 28.3 46.5  
Medicago_pep IMGA|Medtr8g147870.1 130 29.5 47.5 Cyclin-like F-box; F-box protein interaction domain chr08_pseudomolecule_IMGAG_V3 36488278-36486163 E EGN_Mt090430 20090702
grape_pep GSVIVT01013506001 149 30.5 48.4  
castor_bean_cds --No_Hits--        
castor_bean_pep 28152.m000886 181 35.4 53.2 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0000571.20 length: 385 aa.
IPR001810 Cyclin-like F-box
method AccNumber shortName E-value location
HMMPfam PF00646 F-box 1.1e-09 8-47
HMMSmart SM00256 no description 4.7e-09 9-49
ProfileScan PS50181 FBOX 11.882 3-54
IPR017451 F-box associated interaction domain
HMMTigr TIGR01640 F_box_assoc_1: 1e-13 102-344
no_ID  
Gene3D G3DSA:3.80.10.10 no description 0.00026 7-43
Seg seg seg NA 255-265
superfamily SSF81383 F-box 6.6e-14 9-179