Jatropha Genome Database

JcCA0317161.10 (JcS_107712.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0317161
Scaffold:
JcS_107712 JcCA0317161(-) =JcCB0398071(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9GXC8_POPTR 491 71.9 77.4 (tr|B9GXC8) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_711734 PE=4 SV=1
Arabidopsis_pep AT2G22670.3 282 51.9 65.3 | Symbols: IAA8 | IAA8; transcription factor | chr2:9637136-9638459 FORWARD
soybean_pep Glyma15g02040.1 384 58.7 67.5  
Medicago_pep IMGA|Medtr2g122570.1 377 58.1 66.9 AUX/IAA protein chr02_pseudomolecule_IMGAG_V3 29440372-29437665 F EGN_Mt090430 20090702
grape_pep GSVIVT01017046001 389 62.5 66.2  
castor_bean_cds 30146.m003546 335 88.4 88.4 Auxin-responsive protein IAA27, putative
castor_bean_pep 30146.m003546 476 71.2 74.9 Auxin-responsive protein IAA27, putative
JAT_13201ests gi|268520266|gb|FM890114.1|FM890114 123 98.6 98.6 FM890114 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003914, mRNA sequence
KJC_r1 KJC_c05831 769 99.3 99.3  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0317161.10 length: 354 aa.
IPR011525 Aux/IAA-ARF-dimerisation
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
ProfileScan PS50962 IAA_ARF 30.888 224-337
no_ID  
HMMPfam PF02309 AUX_IAA 1.8e-82 49-346
Seg seg seg NA 26-54
superfamily SSF54277 CAD 6.4e-10 219-335