Jatropha Genome Database

JcCA0316451.10 (JcS_100116.70)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0316451
Scaffold:
JcS_100116 JcCA0113611(-) =JcCB0402371(-) =JcCB0097901(+) =JcCA0125231(+) =JcCA0316451(+) =JcCB0112461(-) =JcCB0120561(+) =JcCB0643441(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A9ZN15_HEVBR 869 89.8 95.5 (tr|A9ZN15) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Hevea brasiliensis GN=HbHDR PE=2 SV=1
Arabidopsis_pep AT4G34350.1 763 77.1 89.7 | Symbols: CLB6, ISPH, HDR | HDR (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE); 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase/ 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | chr4:16428681-16431038 REVERSE
soybean_pep Glyma12g05010.1 786 80.7 91.3  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01031908001 701 86.6 95.3  
castor_bean_cds 29851.m002455 1332 88.5 88.5 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative
castor_bean_pep 29851.m002455 852 88.0 95.3 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c00759 2458 99.9 99.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0316451.10 length: 461 aa.
IPR003451 LytB protein
method AccNumber shortName E-value location
Biological Process GO:0019288 isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway    
Biological Process GO:0055114 oxidation reduction    
HAMAP MF_00191 ISPH_MF_00191 28.604 106-453
HMMPfam PF02401 LYTB 8.1e-88 108-448
HMMTigr TIGR00216 ispH_lytB: 5.3e-133 107-452