Jatropha Genome Database

JcCA0316141.30  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0316141
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9T2B5_RICCO 463 92.5 95.4 (tr|B9T2B5) 1-deoxyxylulose-5-phosphate synthase, putative OS=Ricinus communis GN=RCOM_0410350 PE=3 SV=1
Arabidopsis_pep AT4G15560.1 376 74.7 85.2 | Symbols: CLA1, DEF, CLA, DXS, DXPS2 | CLA1 (CLOROPLASTOS ALTERADOS 1); 1-deoxy-D-xylulose-5-phosphate synthase | chr4:8884218-8887254 FORWARD
soybean_pep Glyma09g33320.1 412 82.7 92.0  
Medicago_pep IMGA|Medtr8g079260.1 412 82.9 90.4 Transketolase, C-terminal-like chr08_pseudomolecule_IMGAG_V3 16467658-16470719 E EGN_Mt090430 20090702
grape_pep GSVIVT01003955001 426 85.7 94.1  
castor_bean_cds 29235.m000235 882 90.6 90.6 1-deoxyxylulose-5-phosphate synthase, putative
castor_bean_pep 29235.m000235 463 92.5 95.4 1-deoxyxylulose-5-phosphate synthase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0316141.30 length: 243 aa.
IPR005475 Transketolase-like, pyrimidine-binding domain
method AccNumber shortName E-value location
HMMPfam PF02779 Transket_pyr 1.6e-16 2-84
IPR005476 Transketolase, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF02780 Transketolase_C 9.8e-33 102-225
IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF52922 TK 1.9e-41 96-234
IPR015941 Transketolase-like, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.920 no description 1.2e-26 101-235
IPR020826 Transketolase binding site
PatternScan PS00802 TRANSKETOLASE_2 NA 29-45
no_ID  
Gene3D G3DSA:3.40.50.970 no description 4.4e-21 2-84
HMMPanther PTHR11624 DEHYDROGENASE 5.3e-104 7-243
HMMPanther PTHR11624:SF20 1-DEOXYXYLULOSE-5-PHOSPHATE 5.3e-104 7-243
superfamily SSF52518 Thiamin 1.4e-26 7-112