Jatropha Genome Database

JcCA0316001.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0316001
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S0Z6_RICCO 1040 88.6 94.5 (tr|B9S0Z6) 9-cis-epoxycarotenoid dioxygenase, putative OS=Ricinus communis GN=RCOM_0632160 PE=4 SV=1
Arabidopsis_pep AT1G30100.1 859 73.7 85.1 | Symbols: NCED5, ATNCED5 | NCED5 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 5); 9-cis-epoxycarotenoid dioxygenase | chr1:10571383-10573152 FORWARD
soybean_pep Glyma08g10190.1 802 65.9 78.9  
Medicago_pep IMGA|Medtr5g025270.1 367 39.9 59.9 Carotenoid oxygenase chr05_pseudomolecule_IMGAG_V3 10102084-10100345 E EGN_Mt090430 20090702
grape_pep GSVIVT01038080001 672 61.6 69.4  
castor_bean_cds 29693.m001992 1120 83.8 83.8 9-cis-epoxycarotenoid dioxygenase, putative
castor_bean_pep 29693.m001992 1040 88.6 94.5 9-cis-epoxycarotenoid dioxygenase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0316001.10 length: 598 aa.
IPR004294 Carotenoid oxygenase
method AccNumber shortName E-value location
HMMPanther PTHR10543 CARTENOID 2.9e-258 85-592
HMMPfam PF03055 RPE65 5.9e-131 123-590
no_ID  
HMMPanther PTHR10543:SF1 9-CIS-EPOXYCAROTENOID 2.9e-258 85-592
Seg seg seg NA 31-47