Jatropha Genome Database

JcCA0315891.20 (JcS_107697.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0315891
Scaffold:
JcS_107697 JcCA0315891(+) =JcCB0357801(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RNK8_RICCO 822 64.7 73.6 (tr|B9RNK8) Sensory transduction histidine kinase, putative OS=Ricinus communis GN=RCOM_1339810 PE=4 SV=1
Arabidopsis_pep AT5G24470.1 272 67.0 76.1 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 5); transcription regulator/ two-component response regulator | chr5:8356204-8358873 REVERSE
soybean_pep Glyma19g44970.1 522 48.9 60.9  
Medicago_pep IMGA|Medtr7g146130.1 447 43.2 56.6 Response regulator receiver; CCT chr07_pseudomolecule_IMGAG_V3 34887893-34891610 E EGN_Mt090430 20090702
grape_pep GSVIVT01027443001 474 57.8 68.5  
castor_bean_cds 30076.m004450 523 86.9 86.9 sensory transduction histidine kinase, putative
castor_bean_pep 30076.m004450 822 64.7 73.6 sensory transduction histidine kinase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c00960 2601 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0315891.20 length: 699 aa.
IPR001789 Signal transduction response regulator, receiver domain
method AccNumber shortName E-value location
Molecular Function GO:0000156 two-component response regulator activity    
Biological Process GO:0000160 two-component signal transduction system (phosphorelay)    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF00072 Response_reg 1.6e-20 54-165
HMMSmart SM00448 no description 8.6e-26 52-167
ProfileScan PS50110 RESPONSE_REGULATORY 27.747 53-171
IPR010402 CCT domain
HMMPfam PF06203 CCT 1.9e-17 645-688
ProfileScan PS51017 CCT 14.892 645-687
IPR011006 CheY-like
superfamily SSF52172 CheY-like 2.6e-29 52-178
no_ID  
Gene3D G3DSA:3.40.50.2300 no description 5.3e-26 53-193
HMMPanther PTHR23283 SENSOR 1.2e-12 10-176
HMMPanther PTHR23283:SF49 TWO-COMPONENT 1.2e-12 10-176
Seg seg seg NA 10-31
582-593