Jatropha Genome Database

JcCA0310961.20 (JcS_100130.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0310961
Scaffold:
JcS_100130 JcCA0310961(+) =JcCB0085061(-) =JcCB0235721(+) =JcCA0251661(+) =JcCB0394911(+) =JcCB0174221(+) =JcCA0305451(+) =JcCB0109281(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A5AKN5_VITVI 124 81.4 91.4 (tr|A5AKN5) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031317 PE=4 SV=1
Arabidopsis_pep AT3G14150.2 105 76.9 87.7 | Symbols: | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative | chr3:4690667-4692679 REVERSE
soybean_pep Glyma08g10240.1 87.4 64.1 81.2  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01016712001 120 80.0 90.0  
castor_bean_cds 29727.m000487 178 87.1 87.1 (S)-2-hydroxy-acid oxidase, putative
castor_bean_pep 29727.m000487 123 87.1 90.0 (S)-2-hydroxy-acid oxidase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c04863 147 96.9 96.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0310961.20 length: 70 aa.
IPR000262 FMN-dependent dehydrogenase
method AccNumber shortName E-value location
Molecular Function GO:0016491 oxidoreductase activity    
HMMPfam PF01070 FMN_dh 1.8e-12 15-69
IPR013785 Aldolase-type TIM barrel
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.20.20.70 no description 9.9e-12 1-70
no_ID  
HMMPanther PTHR10578 (S)-2-HYDROXY-ACID 4.2e-16 25-70
HMMPanther PTHR10578:SF9 (S)-2-HYDROXY-ACID 4.2e-16 25-70
superfamily SSF51395 FMN-linked 9.7e-13 4-69