Jatropha Genome Database

JcCA0310961.10 (JcS_100130.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0310961
Scaffold:
JcS_100130 JcCA0310961(+) =JcCB0085061(-) =JcCB0235721(+) =JcCA0251661(+) =JcCB0394911(+) =JcCB0174221(+) =JcCA0305451(+) =JcCB0109281(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9ST69_RICCO 501 71.3 75.7 (tr|B9ST69) (S)-2-hydroxy-acid oxidase, putative OS=Ricinus communis GN=RCOM_0684750 PE=4 SV=1
Arabidopsis_pep AT3G14130.1 449 59.8 74.8 | Symbols: | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative | chr3:4685844-4687852 REVERSE
soybean_pep Glyma08g18750.3 354 53.8 64.3  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01016714001 481 66.9 76.0  
castor_bean_cds 29727.m000481 821 87.1 87.1 (S)-2-hydroxy-acid oxidase, putative
castor_bean_pep 29727.m000481 501 71.3 75.7 (S)-2-hydroxy-acid oxidase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c04863 107 86.1 86.1  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0310961.10 length: 340 aa.
IPR000262 FMN-dependent dehydrogenase
method AccNumber shortName E-value location
Molecular Function GO:0016491 oxidoreductase activity    
HMMPfam PF01070 FMN_dh 8.8e-112 46-328
IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation reduction    
PatternScan PS00557 FMN_HYDROXY_ACID_DH_1 NA 225-231
IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent
Molecular Function GO:0010181 FMN binding    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation reduction    
HMMPIR PIRSF000138 Alpha-hydroxy 3.5e-123 1-332
ProfileScan PS51349 FMN_HYDROXY_ACID_DH_2 90.811 1-332
IPR013785 Aldolase-type TIM barrel
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.20.20.70 no description 1.5e-103 1-330
no_ID  
HMMPanther PTHR10578 (S)-2-HYDROXY-ACID 9.7e-177 46-340
HMMPanther PTHR10578:SF9 (S)-2-HYDROXY-ACID 9.7e-177 46-340
Seg seg seg NA 67-74
270-281
superfamily SSF51395 FMN-linked 1.7e-93 4-330