Jatropha Genome Database

JcCA0310221.20 (JcS_101792.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0310221
Scaffold:
JcS_101792 JcCA0310221(-) =JcCA0309861(+) =JcCB0372261(+) =JcCA0154771(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9REY0_RICCO 1013 92.2 96.2 (tr|B9REY0) Shikimate dehydrogenase, putative OS=Ricinus communis GN=RCOM_1429650 PE=3 SV=1
Arabidopsis_pep AT3G06350.1 671 63.0 81.1 | Symbols: EMB3004, MEE32 | MEE32 (MATERNAL EFFECT EMBRYO ARREST 32); 3-dehydroquinate dehydratase/ NADP or NADPH binding / binding / catalytic/ shikimate 5-dehydrogenase | chr3:1924536-1927701 REVERSE
soybean_pep Glyma01g20760.2 678 65.3 80.3  
Medicago_pep IMGA|Medtr4g125380.1 610 61.6 77.1 Dehydroquinase class I; Shikimate/quinate 5-dehydrogenase; chr04_pseudomolecule_IMGAG_V3 29552562-29559339 E EGN_Mt090430 20090702
grape_pep GSVIVT01021978001 942 84.9 92.4  
castor_bean_cds 30128.m008684 1403 86.4 86.4 shikimate dehydrogenase, putative
castor_bean_pep 30128.m008684 1013 92.2 96.2 shikimate dehydrogenase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c04286 1568 99.6 99.6  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0310221.20 length: 524 aa.
IPR001381 Dehydroquinase class I
method AccNumber shortName E-value location
Molecular Function GO:0003855 3-dehydroquinate dehydratase activity    
HAMAP MF_00214 AROD_MF_00214 21.717 18-240
HMMPfam PF01487 DHquinase_I 2.5e-72 19-237
HMMTigr TIGR01093 aroD: 5.2e-78 17-236
IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
Molecular Function GO:0004764 shikimate 5-dehydrogenase activity    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0055114 oxidation reduction    
HMMPfam PF01488 Shikimate_DH 9e-14 370-446
IPR011342 Quinate/shikimate 5-dehydrogenase
Molecular Function GO:0004764 shikimate 5-dehydrogenase activity    
Molecular Function GO:0050661 NADP or NADPH binding    
Biological Process GO:0055114 oxidation reduction    
HMMTigr TIGR00507 aroE: 5.7e-62 246-524
IPR013708 Shikimate dehydrogenase substrate binding, N-terminal
HMMPfam PF08501 Shikimate_dh_N 9.4e-23 250-331
IPR013785 Aldolase-type TIM barrel
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.20.20.70 no description 1.4e-64 1-237
IPR016040 NAD(P)-binding domain
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005488 binding    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.720 no description 3.6e-35 343-518
superfamily SSF51735 NAD(P)-binding 7.7e-37 345-523
no_ID  
Gene3D G3DSA:3.40.192.10 no description 6.3e-25 241-342
HAMAP MF_00222 AROE_MF_00222 28.944 246-523
HMMPanther PTHR21089 SHIKIMATE 2.8e-40 387-523
superfamily SSF51569 Aldolase 1e-62 1-239
superfamily SSF53223 Aminoacid 5.5e-32 235-344