Jatropha Genome Database

JcCA0309091.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0309091
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9I5I1_POPTR 595 50.7 71.9 (tr|B9I5I1) Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_243072 PE=4 SV=1
Arabidopsis_pep AT5G23960.1 436 41.6 61.2 | Symbols: ATTPS21, TPS21 | TPS21 (TERPENE SYNTHASE 21); (-)-E-beta-caryophyllene synthase/ alpha-humulene synthase | chr5:8092969-8095128 FORWARD
soybean_pep Glyma12g16990.1 397 39.1 60.7  
Medicago_pep IMGA|Medtr6g008950.1 441 41.2 63.5 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid; Terpenoid synthase chr06_pseudomolecule_IMGAG_V3 1339518-1343067 E EGN_Mt090430 20090702
grape_pep GSVIVT01014569001 467 42.0 63.9  
castor_bean_cds 29910.m000944 81.8 93.0 93.0 Terpinolene synthase, chloroplast precursor, putative
castor_bean_pep 30169.m006314 572 52.3 72.1 Casbene synthase, chloroplast precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0309091.10 length: 555 aa.
IPR001906 Terpene synthase-like
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF01397 Terpene_synth 9.5e-55 31-203
IPR005630 Terpene synthase, metal-binding domain
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF03936 Terpene_synth_C 1.1e-75 233-501
IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
superfamily SSF48239 Terpenoid 6.2e-64 25-229
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 7.2e-115 194-555
superfamily SSF48576 Terpenoid 3.1e-114 229-555
no_ID  
Coil coil coiled-coil NA 36-68
Seg seg seg NA 48-66