Jatropha Genome Database

JcCA0308311.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0308311
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SBV6_RICCO 890 77.7 87.6 (tr|B9SBV6) (+)-delta-cadinene synthase isozyme A, putative OS=Ricinus communis GN=RCOM_1045160 PE=4 SV=1
Arabidopsis_pep AT5G23960.1 414 37.8 62.2 | Symbols: ATTPS21, TPS21 | TPS21 (TERPENE SYNTHASE 21); (-)-E-beta-caryophyllene synthase/ alpha-humulene synthase | chr5:8092969-8095128 FORWARD
soybean_pep Glyma12g16990.1 502 45.2 67.2  
Medicago_pep IMGA|Medtr6g008950.1 518 46.6 67.5 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid; Terpenoid synthase chr06_pseudomolecule_IMGAG_V3 1339518-1343067 E EGN_Mt090430 20090702
grape_pep GSVIVT01014569001 629 54.7 75.8  
castor_bean_cds 29910.m000951 722 81.4 81.4 (+)-delta-cadinene synthase isozyme A, putative
castor_bean_pep 29910.m000951 890 77.7 87.6 (+)-delta-cadinene synthase isozyme A, putative
JAT_13201ests gi|268518859|gb|FM889102.1|FM889102 268 98.6 98.6 FM889102 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002675, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0308311.10 length: 546 aa.
IPR001906 Terpene synthase-like
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF01397 Terpene_synth 1.5e-59 23-193
IPR005630 Terpene synthase, metal-binding domain
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF03936 Terpene_synth_C 5.9e-89 223-491
IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
superfamily SSF48239 Terpenoid 3.9e-68 19-219
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 1.8e-127 184-546
superfamily SSF48576 Terpenoid 1.7e-127 219-546