Jatropha Genome Database

JcCA0306971.20 (JcS_101048.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0306971
Scaffold:
JcS_101048 JcCB0134471(+) =JcCA0306971(+) =JcCB0389891(-) =JcCD0061002(-) =JcCB1005201(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9S2Z0_RICCO 320 76.5 82.5 (tr|B9S2Z0) Porphobilinogen deaminase, putative OS=Ricinus communis GN=RCOM_1534040 PE=3 SV=1
Arabidopsis_pep AT5G08280.1 265 66.7 75.0 | Symbols: HEMC | HEMC (HYDROXYMETHYLBILANE SYNTHASE); hydroxymethylbilane synthase | chr5:2663763-2665596 REVERSE
soybean_pep Glyma12g02380.2 271 77.4 85.9  
Medicago_pep IMGA|Medtr4g104170.1 279 72.1 78.6 Porphobilinogen deaminase chr04_pseudomolecule_IMGAG_V3 22656866-22659888 F EGN_Mt090430 20090702
grape_pep GSVIVT01002505001 267 79.0 88.3  
castor_bean_cds 30153.m000741 486 87.1 87.1 porphobilinogen deaminase, putative
castor_bean_pep 30153.m000741 320 76.5 82.5 porphobilinogen deaminase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c04348 722 99.7 99.7  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0306971.20 length: 217 aa.
IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase
method AccNumber shortName E-value location
Molecular Function GO:0004418 hydroxymethylbilane synthase activity    
Biological Process GO:0033014 tetrapyrrole biosynthetic process    
FPrintScan PR00151 PORPHBDMNASE 2.6e-27 118-138
149-168
197-214
HMMPanther PTHR11557 PORPHOBILINOGEN 5.8e-20 151-216
HMMPfam PF01379 Porphobil_deam 1.6e-51 75-216
no_ID  
Gene3D G3DSA:3.40.190.10 no description 6.8e-38 70-193
Seg seg seg NA 183-196
superfamily SSF53850 Periplasmic 2.7e-47 72-216