Jatropha Genome Database

JcCA0304441.20 (JcS_110088.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0304441
Scaffold:
JcS_110088 JcCB0423311(-) =JcCA0304441(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl D7TML7_VITVI 439 80.5 87.4 (tr|D7TML7) Whole genome shotgun sequence of line PN40024, scaffold_19.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016434001 PE=4 SV=1
Arabidopsis_pep AT5G02010.1 380 75.0 88.4 | Symbols: ATROPGEF7, ROPGEF7 | ROPGEF7; Rho guanyl-nucleotide exchange factor | chr5:383493-385698 FORWARD
soybean_pep Glyma02g41980.1 407 75.5 83.6  
Medicago_pep IMGA|Medtr3g092590.1 392 73.0 82.5 Protein of unknown function DUF315 chr03_pseudomolecule_IMGAG_V3 21795241-21791252 E EGN_Mt090430 20090702
grape_pep GSVIVT01016434001 439 80.5 87.4  
castor_bean_cds 28934.m000056 331 81.6 81.6 Rop guanine nucleotide exchange factor, putative
castor_bean_pep 30143.m001222 412 76.8 82.9 Rop guanine nucleotide exchange factor, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c11548 1076 99.8 99.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0304441.20 length: 319 aa.
IPR005512 Rop nucleotide exchanger, PRONE
method AccNumber shortName E-value location
Molecular Function GO:0005089 Rho guanyl-nucleotide exchange factor activity    
HMMPfam PF03759 PRONE 5.9e-111 100-317
ProfileScan PS51334 PRONE 76.099 93-319
no_ID  
Seg seg seg NA 21-47