Jatropha Genome Database

JcCA0290181.10 (JcS_102654.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0290181
Scaffold:
JcS_102654 JcCB0829071(-) =JcCA0290181(+) =JcCB0730961(-) =JcCB0100861(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SP75_RICCO 930 79.7 83.1 (tr|B9SP75) DELLA protein GAIP-B, putative OS=Ricinus communis GN=RCOM_0629510 PE=4 SV=1
Arabidopsis_pep AT2G01570.1 768 67.3 74.8 | Symbols: RGA1, RGA | RGA1 (REPRESSOR OF GA1-3 1); protein binding / transcription factor | chr2:255581-257344 REVERSE
soybean_pep Glyma05g27190.1 760 66.2 74.2  
Medicago_pep IMGA|Medtr7g148270.1 305 42.0 59.3 GRAS transcription factor chr07_pseudomolecule_IMGAG_V3 35104592-35102180 H EGN_Mt090430 20090702
grape_pep GSVIVT01011710001 394 73.5 77.1  
castor_bean_cds 29692.m000540 904 85.3 85.3 DELLA protein GAIP-B, putative
castor_bean_pep 29692.m000540 930 79.7 83.1 DELLA protein GAIP-B, putative
JAT_13201ests gi|268521365|gb|FM894117.1|FM894117 99.6 86.4 86.4 FM894117 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004301, mRNA sequence
KJC_r1 KJC_c00326 2440 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0290181.10 length: 597 aa.
IPR005202 Transcription factor GRAS
method AccNumber shortName E-value location
HMMPfam PF03514 GRAS 3.4e-138 234-593
ProfileScan PS50985 GRAS 68.192 208-572
IPR021914 Transcriptional factor DELLA, N-terminal
HMMPfam PF12041 DELLA 3.6e-39 28-98
no_ID  
Seg seg seg NA 163-167
176-219