Jatropha Genome Database

JcCA0288941.10 (JcS_103432.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0288941
Scaffold:
JcS_103432 JcCA0288941(-) =JcCA0285211(+) =JcCB0446321(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A5BLF6_VITVI 166 31.8 47.9 (tr|A5BLF6) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040899 PE=4 SV=1
Arabidopsis_pep AT4G26340.1 133 29.0 47.3 | Symbols: | F-box family protein | chr4:13324130-13325559 FORWARD
soybean_pep Glyma20g28060.1 128 37.3 52.5  
Medicago_pep IMGA|Medtr3g062160.1 168 32.9 49.2 Cyclin-like F-box; FBD; chr03_pseudomolecule_IMGAG_V3 14259455-14263440 E EGN_Mt090430 20090702
grape_pep GSVIVT01038063001 131 34.1 50.4  
castor_bean_cds --No_Hits--        
castor_bean_pep 30138.m003851 80.1 23.8 43.6 ubiquitin-protein ligase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0288941.10 length: 388 aa.
IPR001810 Cyclin-like F-box
method AccNumber shortName E-value location
HMMPfam PF00646 F-box 8.6e-09 6-41
HMMSmart SM00256 no description 0.0013 10-53
ProfileScan PS50181 FBOX 11.246 4-52
IPR013596 FBD
HMMPfam PF08387 FBD 1.5e-11 332-376
no_ID  
superfamily SSF52047 RNI-like 2.2e-09 87-320
superfamily SSF81383 F-box 2.7e-12 2-41