Jatropha Genome Database

JcCA0287661.20 (JcS_107419.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0287661
Scaffold:
JcS_107419 JcCA0287661(+) =JcCA0252741(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S397_RICCO 236 41.2 57.2 (tr|B9S397) Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_0731710 PE=4 SV=1
Arabidopsis_pep AT4G12560.2 131 28.8 49.1 | Symbols: | F-box family protein | chr4:7441815-7443157 FORWARD
soybean_pep Glyma09g01330.2 124 27.8 47.4  
Medicago_pep IMGA|AC233662_36.1 117 28.0 46.8 Cyclin-like F-box; F-box protein interaction domain AC233662.1 181241-179504 E EGN_Mt090430 20090702
grape_pep GSVIVT01013506001 115 29.2 47.8  
castor_bean_cds --No_Hits--        
castor_bean_pep 29751.m001829 236 41.2 57.2 ubiquitin-protein ligase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0287661.20 length: 367 aa.
IPR001810 Cyclin-like F-box
method AccNumber shortName E-value location
HMMPfam PF00646 F-box 2.1e-05 2-39
HMMSmart SM00256 no description 2.2e-07 3-43
ProfileScan PS50181 FBOX 9.497 1-43
IPR006527 F-box associated domain, type 1
HMMPfam PF07734 FBA_1 5.3e-09 208-346
IPR017451 F-box associated interaction domain
HMMTigr TIGR01640 F_box_assoc_1: 8e-16 98-331
no_ID  
superfamily SSF81383 F-box 5e-08 3-46