Jatropha Genome Database

JcCA0268211.10 (JcS_100720.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0268211
Scaffold:
JcS_100720 JcCB0902031(-) =JcCA0268211(-) =JcCA0152031(-) =JcCB0028271(-) =JcCA0311281(-) =JcCB0466631(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9I0D0_POPTR 153 29.7 46.4 (tr|B9I0D0) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_569113 PE=4 SV=1
Arabidopsis_pep AT4G12560.2 92.0 26.3 44.0 | Symbols: | F-box family protein | chr4:7441815-7443157 FORWARD
soybean_pep Glyma15g10860.1 122 31.5 48.4  
Medicago_pep IMGA|Medtr5g027540.1 132 27.6 46.3 Cyclin-like F-box; F-box protein interaction domain chr05_pseudomolecule_IMGAG_V3 11241472-11238820 E EGN_Mt090430 20090702
grape_pep GSVIVT01031692001 99.4 27.7 45.6  
castor_bean_cds --No_Hits--        
castor_bean_pep 27752.m000045 102 28.3 47.9 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0268211.10 length: 395 aa.
IPR001810 Cyclin-like F-box
method AccNumber shortName E-value location
HMMPfam PF00646 F-box 6.1e-11 18-55
HMMSmart SM00256 no description 1.9e-07 22-61
ProfileScan PS50181 FBOX 11.829 16-62
IPR006527 F-box associated domain, type 1
HMMPfam PF07734 FBA_1 2.2e-07 225-311
IPR017451 F-box associated interaction domain
HMMTigr TIGR01640 F_box_assoc_1: 3e-18 111-350
no_ID  
Seg seg seg NA 3-34
superfamily SSF81383 F-box 3.2e-13 9-126