Jatropha Genome Database

JcCA0265151.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0265151
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9H1Q9_POPTR 274 71.0 82.4 (tr|B9H1Q9) Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_196402 PE=4 SV=1
Arabidopsis_pep AT2G17120.1 208 53.1 70.8 | Symbols: LYM2 | LYM2 (LYSM DOMAIN GPI-ANCHORED PROTEIN 2 PRECURSOR) | chr2:7459156-7460648 FORWARD
soybean_pep Glyma05g26420.1 181 46.1 68.4  
Medicago_pep IMGA|AC235671_7.3 202 51.6 66.1 Peptidoglycan-binding LysM AC235671.2 31615-27432 E EGN_Mt090430 20090702
grape_pep GSVIVT01023937001 271 67.0 80.9  
castor_bean_cds 30122.m000356 117 79.7 79.7 LysM domain GPI-anchored protein 2 precursor, putative
castor_bean_pep 30122.m000356 271 69.8 85.7 LysM domain GPI-anchored protein 2 precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0265151.10 length: 307 aa.
IPR002482 Peptidoglycan-binding Lysin subgroup
method AccNumber shortName E-value location
Biological Process GO:0016998 cell wall macromolecule catabolic process    
HMMSmart SM00257 no description 6.2e-10 156-203
220-264
IPR018392 Peptidoglycan-binding lysin domain
Biological Process GO:0016998 cell wall macromolecule catabolic process    
HMMPfam PF01476 LysM 3.8e-08 157-203
221-264
no_ID  
Seg seg seg NA 16-27
53-74
268-281
superfamily SSF54106 LysM 6.6e-07 153-205
217-266