Jatropha Genome Database

JcCA0261891.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0261891
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9HZW3_POPTR 237 40.4 57.8 (tr|B9HZW3) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_568920 PE=4 SV=1
Arabidopsis_pep AT3G23880.1 92.8 27.1 44.8 | Symbols: | F-box family protein | chr3:8622061-8623155 REVERSE
soybean_pep Glyma15g34580.1 125 31.5 49.2  
Medicago_pep IMGA|Medtr8g147870.1 110 28.4 44.6 Cyclin-like F-box; F-box protein interaction domain chr08_pseudomolecule_IMGAG_V3 36488278-36486163 E EGN_Mt090430 20090702
grape_pep GSVIVT01013506001 129 32.7 49.7  
castor_bean_cds --No_Hits--        
castor_bean_pep 28152.m000886 148 30.3 49.2 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0261891.10 length: 370 aa.
IPR001810 Cyclin-like F-box
method AccNumber shortName E-value location
HMMPfam PF00646 F-box 3.4e-07 3-40
HMMSmart SM00256 no description 6.8e-06 4-44
ProfileScan PS50181 FBOX 12.703 1-45
IPR013187 F-box associated domain, type 3
HMMPfam PF08268 FBA_3 4.5e-05 203-290
IPR017451 F-box associated interaction domain
HMMTigr TIGR01640 F_box_assoc_1: 4.6e-09 98-334
no_ID  
superfamily SSF81383 F-box 7.7e-14 1-142