Jatropha Genome Database

JcCA0261151.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0261151
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RI74_RICCO 597 69.4 80.8 (tr|B9RI74) Lipoxygenase OS=Ricinus communis GN=RCOM_1576890 PE=3 SV=1
Arabidopsis_pep AT3G45140.1 320 44.5 60.0 | Symbols: LOX2, ATLOX2 | LOX2 (LIPOXYGENASE 2); lipoxygenase | chr3:16525437-16529233 FORWARD
soybean_pep Glyma12g05840.1 392 48.2 64.1  
Medicago_pep IMGA|Medtr3g111150.1 331 47.8 61.6 Plant lipoxygenase; Lipase/lipooxygenase, PLAT/LH2 chr03_pseudomolecule_IMGAG_V3 28179317-28175366 E EGN_Mt090430 20090702
grape_pep GSVIVT01025339001 484 56.9 71.3  
castor_bean_cds 30169.m006389 246 78.6 78.6 lipoxygenase, putative
castor_bean_pep 30169.m006389 597 69.4 80.8 lipoxygenase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c07929 1752 98.7 98.7  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0261151.10 length: 423 aa.
IPR000907 Lipoxygenase
method AccNumber shortName E-value location
Molecular Function GO:0046872 metal ion binding    
HMMPanther PTHR11771 LIPOXYGENASE 1.3e-145 34-420
IPR001024 Lipoxygenase, LH2
Gene3D G3DSA:2.60.60.20 no description 2.9e-47 64-226
HMMPfam PF01477 PLAT 1.3e-09 110-199
HMMSmart SM00308 no description 1.8e-33 69-205
ProfileScan PS50095 PLAT 19.044 84-204
IPR001246 Lipoxygenase, plant
Molecular Function GO:0005506 iron ion binding    
Molecular Function GO:0016165 lipoxygenase activity    
Biological Process GO:0055114 oxidation reduction    
FPrintScan PR00468 PLTLPOXGNASE 1.4e-38 174-192
200-221
239-255
271-290
336-357
382-398
IPR008976 Lipase/lipooxygenase, PLAT/LH2
superfamily SSF49723 Lipase/lipooxygenase 1e-38 64-208
IPR013819 Lipoxygenase, C-terminal
Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation reduction    
HMMPfam PF00305 Lipoxygenase 5.6e-65 215-420
ProfileScan PS51393 LIPOXYGENASE_3 71.577 207-423
superfamily SSF48484 Lipoxigenase 4.8e-59 209-420
no_ID  
Gene3D G3DSA:4.10.372.10 no description 1.3e-20 326-413
Gene3D G3DSA:4.10.375.10 no description 5.5e-40 227-325
HMMPanther PTHR11771:SF2 LIPOXYGENASE 1.3e-145 34-420
Seg seg seg NA 100-109
217-229