Jatropha Genome Database

JcCA0254251.10 (JcS_108153.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0254251
Scaffold:
JcS_108153 JcCA0009532(+) =JcCA0254251(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9S945_RICCO 357 86.3 90.4 (tr|B9S945) Rac gtpase, putative OS=Ricinus communis GN=RCOM_1012270 PE=3 SV=1
Arabidopsis_pep AT5G45970.1 338 89.3 94.9 | Symbols: ARAC2, ROP7, ATRAC2, ATROP7 | ARAC2 (ARABIDOPSIS RAC-LIKE 2); GTP binding | chr5:18643761-18645758 FORWARD
soybean_pep Glyma12g33560.2 351 86.8 89.3  
Medicago_pep IMGA|Medtr2g132410.1 345 84.8 88.8 Ras GTPase chr02_pseudomolecule_IMGAG_V3 32003647-32002013 E EGN_Mt090430 20090702
grape_pep GSVIVT01020653001 350 93.8 96.6  
castor_bean_cds 29900.m001556 702 90.9 90.9 rac gtpase, putative
castor_bean_pep 29900.m001556 357 86.3 90.4 rac gtpase, putative
JAT_13201ests gi|268516974|gb|FM892526.1|FM892526 111 83.5 83.5 FM892526 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003095, mRNA sequence
KJC_r1 KJC_s15279 111 83.5 83.5  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0254251.10 length: 197 aa.
IPR001806 Ras GTPase
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 3.2e-37 7-28
30-46
47-69
109-122
155-177
IPR003577 Ras small GTPase, Ras type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00173 no description 6.7e-23 4-180
IPR003578 Small GTPase, Rho type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00174 no description 7.5e-110 9-180
ProfileScan PS51420 RHO 24.669 1-177
IPR003579 Ras small GTPase, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 no description 1e-23 7-180
IPR005225 Small GTP-binding protein
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 1.3e-30 4-158
IPR013753 Ras
HMMPfam PF00071 Ras 2.4e-51 8-178
no_ID  
Gene3D G3DSA:3.40.50.300 no description 8.5e-56 7-185
HMMPanther PTHR11708 RAS-RELATED 3.6e-144 12-197
HMMPanther PTHR11708:SF285RAS-RELATED PROTEIN 3.6e-144 12-197
Seg seg seg NA 179-190
superfamily SSF52540 P-loop 4.5e-54 4-192