Jatropha Genome Database

JcCA0252741.10 (JcS_107419.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0252741
Scaffold:
JcS_107419 JcCA0287661(+) =JcCA0252741(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S397_RICCO 146 37.5 52.0 (tr|B9S397) Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_0731710 PE=4 SV=1
Arabidopsis_pep AT4G12560.2 83.6 23.9 42.7 | Symbols: | F-box family protein | chr4:7441815-7443157 FORWARD
soybean_pep Glyma17g01190.2 84.7 27.3 43.0  
Medicago_pep IMGA|Medtr2g029980.1 78.2 26.8 46.0 Cyclin-like F-box; F-box protein interaction domain chr02_pseudomolecule_IMGAG_V3 8162369-8165527 E EGN_Mt090430 20090702
grape_pep GSVIVT01026027001 84.3 27.4 50.9  
castor_bean_cds --No_Hits--        
castor_bean_pep 29751.m001829 146 37.5 52.0 ubiquitin-protein ligase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0252741.10 length: 310 aa.
IPR006527 F-box associated domain, type 1
method AccNumber shortName E-value location
HMMPfam PF07734 FBA_1 2.9e-08 159-285
IPR017451 F-box associated interaction domain
HMMTigr TIGR01640 F_box_assoc_1: 5.5e-18 58-279
no_ID  
Seg seg seg NA 58-69