| JcS_108585 | JcCB0149961(-) =JcCA0246841(+) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9S143_RICCO | 98.2 | 73.4 | 79.7 | (tr|B9S143) Mads box protein, putative OS=Ricinus communis GN=RCOM_0633450 PE=3 SV=1 |
| Arabidopsis_pep | AT2G34440.1 | 87.8 | 47.2 | 63.2 | | Symbols: AGL29 | AGL29 (AGAMOUS-LIKE 29); transcription factor | chr2:14526950-14527468 FORWARD |
| soybean_pep | Glyma18g20830.1 | 83.6 | 69.6 | 82.1 | |
| Medicago_pep | IMGA|Medtr8g145590.1 | 85.1 | 69.6 | 82.1 | Transcription factor, MADS-box chr08_pseudomolecule_IMGAG_V3 35425634-35426357 H EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01006592001 | 72.8 | 58.2 | 76.4 | |
| castor_bean_cds | --No_Hits-- | ||||
| castor_bean_pep | 29693.m002039 | 98.2 | 73.4 | 79.7 | mads box protein, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCA0246841.10 | length: 106 aa. | |||
| IPR002100 | Transcription factor, MADS-box | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003700 | transcription factor activity | ||
| Cellular Component | GO:0005634 | nucleus | ||
| Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
| Molecular Function | GO:0043565 | sequence-specific DNA binding | ||
| FPrintScan | PR00404 | MADSDOMAIN | 1.5e-08 | 3-23 37-58 |
| HMMPfam | PF00319 | SRF-TF | 3.1e-12 | 11-52 |
| HMMSmart | SM00432 | no description | 7.2e-17 | 1-59 |
| ProfileScan | PS50066 | MADS_BOX_2 | 18.432 | 1-60 |
| superfamily | SSF55455 | SRF-like | 6e-17 | 1-84 |
| no_ID | ||||
| HMMPanther | PTHR11945 | MADS | 5.8e-13 | 13-55 |