Jatropha Genome Database

JcCA0238321.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0238321
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9I5I1_POPTR 508 60.3 74.1 (tr|B9I5I1) Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_243072 PE=4 SV=1
Arabidopsis_pep AT5G23960.1 320 40.8 58.8 | Symbols: ATTPS21, TPS21 | TPS21 (TERPENE SYNTHASE 21); (-)-E-beta-caryophyllene synthase/ alpha-humulene synthase | chr5:8092969-8095128 FORWARD
soybean_pep Glyma12g16990.1 313 40.8 60.1  
Medicago_pep IMGA|Medtr5g081450.1 331 42.2 62.1 Terpene synthase-like; Terpenoid synthase chr05_pseudomolecule_IMGAG_V3 30599999-30603716 E EGN_Mt090430 20090702
grape_pep GSVIVT01014569001 361 45.2 63.0  
castor_bean_cds 30169.m006314 101 82.8 82.8 Casbene synthase, chloroplast precursor, putative
castor_bean_pep 30169.m006314 480 54.5 73.7 Casbene synthase, chloroplast precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0238321.10 length: 477 aa.
IPR001906 Terpene synthase-like
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF01397 Terpene_synth 3.6e-55 49-215
IPR005630 Terpene synthase, metal-binding domain
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF03936 Terpene_synth_C 3.3e-73 245-471
IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
superfamily SSF48239 Terpenoid 5.9e-62 38-240
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 1.2e-90 219-471
superfamily SSF48576 Terpenoid 1.3e-88 241-471
no_ID  
Coil coil coiled-coil NA 46-67
Seg seg seg NA 143-157