Jatropha Genome Database

JcCA0154641.20  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0154641
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9T1U0_RICCO 619 78.3 84.1 (tr|B9T1U0) Tryptophan biosynthesis protein, trpc, putative OS=Ricinus communis GN=RCOM_0691140 PE=4 SV=1
Arabidopsis_pep AT5G48220.1 513 68.6 79.6 | Symbols: | indole-3-glycerol phosphate synthase, putative | chr5:19549930-19552046 FORWARD
soybean_pep Glyma14g05810.1 562 71.3 79.8  
Medicago_pep IMGA|Medtr5g091460.1 542 68.3 78.8 Indole-3-glycerol phosphate synthase; TonB box, N-terminal; chr05_pseudomolecule_IMGAG_V3 35789863-35784612 E EGN_Mt090430 20090702
grape_pep GSVIVT01030116001 569 77.8 85.3  
castor_bean_cds 29732.m000319 936 87.2 87.2 tryptophan biosynthesis protein, trpc, putative
castor_bean_pep 29732.m000319 619 78.3 84.1 tryptophan biosynthesis protein, trpc, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c10172 1715 99.1 99.1  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0154641.20 length: 398 aa.
IPR001468 Indole-3-glycerol phosphate synthase, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0004425 indole-3-glycerol-phosphate synthase activity    
Biological Process GO:0006568 tryptophan metabolic process    
PatternScan PS00614 IGPS NA 179-197
IPR011060 Ribulose-phosphate binding barrel
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF51366 Ribulose-phoshate 2.7e-85 116-393
IPR013785 Aldolase-type TIM barrel
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.20.20.70 no description 1.7e-81 123-392
IPR013798 Indole-3-glycerol phosphate synthase
HMMPfam PF00218 IGPS 5.1e-82 126-388
no_ID  
HMMPanther PTHR22854 TRYPTOPHAN 4.7e-187 76-397
HMMPanther PTHR22854:SF2 INDOLE-3-GLYCEROL 4.7e-187 76-397
Seg seg seg NA 93-105
305-315