Jatropha Genome Database

JcCA0154071.10 (JcS_200119.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0154071
Scaffold:
JcS_200119 JcCD0182114(+) =JcCB0951551(+) =JcPR03DZZX0(-) =JcCB0548251(+) =JcCA0154071(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S3W2_RICCO 284 95.7 99.3 (tr|B9S3W2) TRANSPORT INHIBITOR RESPONSE 1 protein, putative OS=Ricinus communis GN=RCOM_0556140 PE=4 SV=1
Arabidopsis_pep AT3G62980.1 270 87.2 97.2 | Symbols: TIR1 | TIR1 (TRANSPORT INHIBITOR RESPONSE 1); auxin binding / protein binding / ubiquitin-protein ligase | chr3:23273479-23276181 REVERSE
soybean_pep Glyma03g36770.1 278 93.6 97.9  
Medicago_pep IMGA|Medtr7g096650.1 171 61.7 75.9 Cyclin-like F-box chr07_pseudomolecule_IMGAG_V3 21663069-21659617 E EGN_Mt090430 20090702
grape_pep GSVIVT01010995001 254 89.0 94.1  
castor_bean_cds 29647.m002022 553 91.6 91.6 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
castor_bean_pep 29647.m002022 284 95.7 99.3 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c00992 841 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0154071.10 length: 141 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.80.10.10 no description 0.00041 1-72
HMMPanther PTHR23125 F-BOX/LEUCINE 1.9e-11 1-24
HMMPanther PTHR23125:SF17 GRR1-RELATED, 1.9e-11 1-24
superfamily SSF52047 RNI-like 2e-09 1-121