Jatropha Genome Database

JcCA0154041.10 (JcS_103056.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0154041
Scaffold:
JcS_103056 JcCA0154041(-) =JcCB0133671(-) =JcCA0080751(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RGS2_RICCO 958 86.8 95.2 (tr|B9RGS2) AMP dependent CoA ligase, putative OS=Ricinus communis GN=RCOM_1443470 PE=4 SV=1
Arabidopsis_pep AT3G21240.1 845 74.5 87.3 | Symbols: 4CL2, AT4CL2 | 4CL2 (4-COUMARATE:COA LIGASE 2); 4-coumarate-CoA ligase | chr3:7454497-7457314 REVERSE
soybean_pep Glyma17g07170.1 877 76.5 89.3  
Medicago_pep IMGA|AC233655_1.1 848 73.7 87.6 AMP-dependent synthetase and ligase AC233655.2 29515-24780 E EGN_Mt090430 20090702
grape_pep GSVIVT01029182001 808 70.7 84.4  
castor_bean_cds 30131.m006921 759 83.8 83.8 AMP dependent CoA ligase, putative
castor_bean_pep 30131.m006921 958 86.8 95.2 AMP dependent CoA ligase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c09541 1976 98.8 98.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0154041.10 length: 543 aa.
IPR000873 AMP-dependent synthetase/ligase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF00501 AMP-binding 6.5e-116 55-468
IPR020845 AMP-binding, conserved site
PatternScan PS00455 AMP_BINDING NA 187-198
no_ID  
Gene3D G3DSA:2.30.38.10 no description 1.8e-24 358-434
Gene3D G3DSA:3.30.300.30 no description 1.6e-27 440-535
Gene3D G3DSA:3.40.50.980 no description 4e-47 25-176
180-345
HMMPanther PTHR11968 ATP-DEPENDENT 3.7e-302 1-539
HMMPanther PTHR11968:SF43 4-COUMARATE--COA 3.7e-302 1-539
superfamily SSF56801 Acetyl-CoA 1.3e-163 27-540