Jatropha Genome Database

JcCA0153841.20 (JcS_106705.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0153841
Scaffold:
JcS_106705 JcCA0020851(-) =JcCA0153841(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SIG1_RICCO 102 28.0 43.6 (tr|B9SIG1) Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1255970 PE=4 SV=1
Arabidopsis_pep AT4G12560.2 97.8 28.2 43.6 | Symbols: | F-box family protein | chr4:7441815-7443157 FORWARD
soybean_pep Glyma15g10860.1 89.0 26.3 43.9  
Medicago_pep IMGA|Medtr2g029930.1 96.7 26.4 43.7 Cyclin-like F-box; F-box protein interaction domain chr02_pseudomolecule_IMGAG_V3 8146117-8151265 E EGN_Mt090430 20090702
grape_pep GSVIVT01031692001 86.7 27.2 40.9  
castor_bean_cds --No_Hits--        
castor_bean_pep 30027.m000838 102 28.0 43.6 ubiquitin-protein ligase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0153841.20 length: 313 aa.
IPR001810 Cyclin-like F-box
method AccNumber shortName E-value location
HMMSmart SM00256 no description 0.0081 5-45
IPR017451 F-box associated interaction domain
HMMTigr TIGR01640 F_box_assoc_1: 1.5e-06 118-311
no_ID  
Seg seg seg NA 26-38
237-250