Jatropha Genome Database

JcCA0153141.20 (JcS_104949.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0153141
Scaffold:
JcS_104949 JcCB0481571(-) =JcCA0153141(+) =JcCB0449001(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9GWF3_POPTR 680 91.4 96.6 (tr|B9GWF3) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_817341 PE=3 SV=1
Arabidopsis_pep AT1G12780.1 649 87.8 93.9 | Symbols: UGE1 | UGE1 (UDP-D-glucose/UDP-D-galactose 4-epimerase 1); UDP-glucose 4-epimerase/ protein dimerization | chr1:4356124-4358120 REVERSE
soybean_pep Glyma08g01480.1 642 86.2 92.5  
Medicago_pep IMGA|Medtr5g009210.1 501 70.6 81.0 UDP-glucose 4-epimerase chr05_pseudomolecule_IMGAG_V3 1959897-1955975 F EGN_Mt090430 20090702
grape_pep GSVIVT01019833001 663 89.7 94.8  
castor_bean_cds 30190.m011159 599 88.2 88.2 UDP-glucose 4-epimerase, putative
castor_bean_pep 30190.m010846 425 74.5 84.6 UDP-glucose 4-epimerase, putative
JAT_13201ests gi|268524905|gb|FM895603.1|FM895603 543 97.7 97.7 FM895603 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002553, mRNA sequence
KJC_r1 KJC_c02729 63.9 93.2 93.2  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0153141.20 length: 348 aa.
IPR001509 NAD-dependent epimerase/dehydratase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0044237 cellular metabolic process    
Molecular Function GO:0050662 coenzyme binding    
HMMPfam PF01370 Epimerase 6.1e-53 6-257
IPR005886 UDP-glucose 4-epimerase
Molecular Function GO:0003978 UDP-glucose 4-epimerase activity    
Biological Process GO:0006012 galactose metabolic process    
HMMPanther PTHR10366:SF39 UDP-GLUCOSE 3.7e-193 8-348
HMMTigr TIGR01179 galE: 6.7e-171 5-344
IPR016040 NAD(P)-binding domain
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005488 binding    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.720 no description 5.9e-63 5-218
superfamily SSF51735 NAD(P)-binding 7.2e-106 4-346
no_ID  
HMMPanther PTHR10366 NAD 3.7e-193 8-348