Jatropha Genome Database

JcCA0152411.10 (JcS_100234.60)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0152411
Scaffold:
JcS_100234 JcCA0296331(-) =JcCB0468081(+) =JcCA0028701(-) =JcCB0733251(-) =JcCA0152411(+) =JcCB0577931(+) =JcCA0145031(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RNG3_RICCO 963 52.9 64.8 (tr|B9RNG3) DNA replication regulator dpb11, putative OS=Ricinus communis GN=RCOM_1347450 PE=4 SV=1
Arabidopsis_pep AT4G02110.1 343 68.5 84.7 | Symbols: | transcription coactivator | chr4:935191-940191 FORWARD
soybean_pep Glyma10g01740.1 389 37.9 49.5  
Medicago_pep IMGA|Medtr1g107030.1 372 57.8 70.1 BRCT; Zinc finger, FYVE/PHD-type chr01_pseudomolecule_IMGAG_V3 22500941-22493346 E EGN_Mt090430 20090702
grape_pep GSVIVT01028102001 171 63.2 77.6  
castor_bean_cds 30076.m004677 617 87.6 87.6 DNA replication regulator dpb11, putative
castor_bean_pep 30076.m004677 963 52.9 64.8 DNA replication regulator dpb11, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0152411.10 length: 958 aa.
IPR001357 BRCT
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
HMMPfam PF00533 BRCT 1.4e-09 112-180
895-958
HMMSmart SM00292 no description 3.9 8-86
106-183
877-958
ProfileScan PS50172 BRCT 9.111 6-96
109-193
890-958
superfamily SSF52113 BRCT 5.2e-11 110-214
13-107
886-958
no_ID  
Coil coil coiled-coil NA 198-219
HMMPanther PTHR13561 DNA 1.2e-76 16-218
HMMPanther PTHR13561:SF5 DNA 1.2e-76 16-218
Seg seg seg NA 356-366
474-484
801-813
819-832