Jatropha Genome Database

JcCA0147671.20  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0147671
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RL90_RICCO 315 78.5 79.5 (tr|B9RL90) Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial, putative OS=Ricinus communis GN=RCOM_1669290 PE=3 SV=1
Arabidopsis_pep AT5G23250.1 296 82.3 85.1 | Symbols: | succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putative | chr5:7830460-7832491 FORWARD
soybean_pep Glyma09g29460.1 300 75.1 77.1  
Medicago_pep IMGA|Medtr6g089770.1 298 88.8 91.3 CoA-binding chr06_pseudomolecule_IMGAG_V3 18694209-18699277 E EGN_Mt090430 20090702
grape_pep GSVIVT01029337001 300 73.2 77.6  
castor_bean_cds 30189.m001676 470 86.5 86.5 Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial precursor, putative
castor_bean_pep 30189.m001675 315 78.5 79.5 Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c04995 644 93.2 93.2  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0147671.20 length: 236 aa.
IPR003781 CoA-binding
method AccNumber shortName E-value location
HMMPfam PF02629 CoA_binding 9.5e-31 48-141
HMMSmart SM00881 no description 1.1e-34 46-142
IPR016040 NAD(P)-binding domain
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005488 binding    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.720 no description 1.4e-51 44-166
superfamily SSF51735 NAD(P)-binding 7.6e-60 36-165
IPR016102 Succinyl-CoA synthetase-like
Gene3D G3DSA:3.40.50.261 no description 5.7e-13 167-208
superfamily SSF52210 Succinyl-CoA 1.1e-13 166-208
no_ID  
HMMPanther PTHR11117 SUCCINYL-COA 3.5e-111 45-205
Seg seg seg NA 12-28
36-44
120-131