Jatropha Genome Database

JcCA0146861.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0146861
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q6R3R2_POPDE 281 44.2 57.7 (tr|Q6R3R2) CONSTANS-like protein CO1 OS=Populus deltoides PE=2 SV=1
Arabidopsis_pep AT5G15840.1 227 39.9 54.6 | Symbols: CO, FG | CO (CONSTANS); transcription factor/ transcription regulator/ zinc ion binding | chr5:5171343-5172697 REVERSE
soybean_pep Glyma08g28370.1 223 37.3 51.5  
Medicago_pep IMGA|Medtr1g016230.1 177 36.3 48.5 Zinc finger, B-box; CCT chr01_pseudomolecule_IMGAG_V3 3096189-3098130 E EGN_Mt090430 20090702
grape_pep GSVIVT01036499001 249 41.9 54.7  
castor_bean_cds 30174.m009047 236 81.4 81.4 zinc finger protein, putative
castor_bean_pep 29496.m000135 249 41.7 54.1 zinc finger protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0146861.10 length: 366 aa.
IPR000315 Zinc finger, B-box
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF00643 zf-B_box 6.4e-07 58-104
HMMSmart SM00336 no description 2.9e-07 14-61
62-104
ProfileScan PS50119 ZF_BBOX 9.855 14-61
57-104
IPR010402 CCT domain
HMMPfam PF06203 CCT 7.9e-18 311-354
ProfileScan PS51017 CCT 16.311 311-353
no_ID  
Seg seg seg NA 151-160
218-233