Jatropha Genome Database

JcCA0141181.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0141181
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9IKI2_POPTR 884 90.8 95.9 (tr|B9IKI2) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_910575 PE=4 SV=1
Arabidopsis_pep AT4G32810.1 696 70.6 83.4 | Symbols: CCD8, MAX4, ATCCD8 | CCD8 (CAROTENOID CLEAVAGE DIOXYGENASE 8); oxidoreductase, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | chr4:15828348-15831299 FORWARD
soybean_pep Glyma04g08910.1 857 86.7 95.0  
Medicago_pep IMGA|Medtr3g130620.1 848 85.6 95.2 Carotenoid oxygenase chr03_pseudomolecule_IMGAG_V3 33198267-33194913 E EGN_Mt090430 20090702
grape_pep GSVIVT01035626001 860 87.1 95.4  
castor_bean_cds 29794.m003382 837 84.4 84.4 retinal pigment epithelium, putative
castor_bean_pep 29794.m003382 730 89.9 96.3 retinal pigment epithelium, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0141181.10 length: 458 aa.
IPR004294 Carotenoid oxygenase
method AccNumber shortName E-value location
HMMPanther PTHR10543 CARTENOID 1.2e-271 2-458
HMMPfam PF03055 RPE65 1.5e-97 1-457
no_ID  
HMMPanther PTHR10543:SF3 RETINAL 1.2e-271 2-458