Jatropha Genome Database

JcCA0141071.10 (JcS_102741.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0141071
Scaffold:
JcS_102741 JcCB0099081(-) =JcCA0141071(-) =JcCB0198751(-) =JcCA0118391(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9N4D5_POPTR 469 92.3 95.1 (tr|B9N4D5) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_744173 PE=4 SV=1
Arabidopsis_pep AT1G31810.1 348 68.4 81.4 | Symbols: | actin binding | chr1:11399922-11405761 REVERSE
soybean_pep Glyma06g21190.1 446 86.6 92.3  
Medicago_pep IMGA|Medtr1g016730.1 365 71.9 81.9 Actin-binding FH2; C2 calcium/lipid-binding region, CaLB; chr01_pseudomolecule_IMGAG_V3 3303853-3295156 H EGN_Mt090430 20090702
grape_pep GSVIVT01007958001 461 90.7 95.6  
castor_bean_cds 30138.m004035 991 88.0 88.0 conserved hypothetical protein
castor_bean_pep 30138.m004035 461 91.1 95.9 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0141071.10 length: 348 aa.
IPR003104 Actin-binding FH2/DRF autoregulatory
method AccNumber shortName E-value location
Molecular Function GO:0003779 actin binding    
Biological Process GO:0016043 cellular component organization    
Biological Process GO:0030036 actin cytoskeleton organization    
HMMSmart SM00498 no description 2.9e-06 68-346
IPR015425 Actin-binding FH2
HMMPfam PF02181 FH2 3.9e-82 77-326
ProfileScan PS51444 FH2 51.657 70-348
superfamily SSF101447 Formin 5.5e-77 26-326
no_ID  
HMMPanther PTHR23213 FORMIN-RELATED 5.5e-143 3-326
HMMPanther PTHR23213:SF18 FORMIN-RELATED 5.5e-143 3-326
Seg seg seg NA 3-48
54-79
328-345