Jatropha Genome Database

JcCA0139031.10 (JcS_106340.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0139031
Scaffold:
JcS_106340 JcCA0139031(-) =JcCB0031431(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S9Y3_RICCO 500 85.5 93.8 (tr|B9S9Y3) Farnesyl-pyrophosphate synthetase, putative OS=Ricinus communis GN=RCOM_0523370 PE=3 SV=1
Arabidopsis_pep AT4G17190.1 414 69.6 83.0 | Symbols: FPS2 | FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2); dimethylallyltranstransferase/ geranyltranstransferase | chr4:9648743-9650865 REVERSE
soybean_pep Glyma15g12780.1 421 69.2 85.1  
Medicago_pep IMGA|Medtr2g032930.1 422 70.3 85.1 Polyprenyl synthetase chr02_pseudomolecule_IMGAG_V3 8852627-8857120 E EGN_Mt090430 20090702
grape_pep GSVIVT01014738001 433 72.8 87.0  
castor_bean_cds 29629.m001434 777 87.5 87.5 farnesyl-pyrophosphate synthetase, putative
castor_bean_pep 29629.m001434 500 85.5 93.8 farnesyl-pyrophosphate synthetase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0139031.10 length: 278 aa.
IPR000092 Polyprenyl synthetase
method AccNumber shortName E-value location
Biological Process GO:0008299 isoprenoid biosynthetic process    
HMMPfam PF00348 polyprenyl_synt 2.1e-63 34-275
PatternScan PS00723 POLYPRENYL_SYNTHET_1 NA 90-104
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 4.2e-75 3-278
superfamily SSF48576 Terpenoid 1.9e-75 1-278
no_ID  
HMMPanther PTHR11525 FARNESYL-PYROPHOSPHATE 4.7e-121 1-276