Jatropha Genome Database

JcCA0130751.10 (JcS_100188.50)

Related links:

GeneModel

Predicted Sequence Links:

Genome Sequence: JcCA0130751

Full length sequence(5219 bp)
Sequence Cut

Init: Term:
reverse complement

Scaffold:

JcS_100188

JcCB0796291(+) =JcCA0271361(-) =JcCA0140461(+) =JcCB0175681(-) =JcCA0130751(+) =JcCB0600541(-) =JcCA0015391(+) =JcCB0572701(+)

Results of Blast2 searches (The best-hits are tabulated.):

database	Accession	Score	Iden (%)	Posi (%)	Definition
trembl	B5KY03_9ROSA	589	90.5	97.1	(tr\|B5KY03) Cinnamate-4-hydroxylase OS=Rubus coreanus PE=2 SV=1
Arabidopsis_pep	AT2G30490.1	520	84.3	93.5	\| Symbols: ATC4H, C4H, CYP73A5 \| C4H (CINNAMATE-4-HYDROXYLASE); trans-cinnamate 4-monooxygenase \| chr2:12993861-12995683 REVERSE
soybean_pep	Glyma14g38580.1	566	87.6	94.1
Medicago_pep	IMGA\|Medtr5g083280.1	537	86.3	94.1	Cytochrome P450 chr05_pseudomolecule_IMGAG_V3 31581773-31577928 F EGN_Mt090430 20090702
grape_pep	GSVIVT01024554001	463	79.7	86.9
castor_bean_cds	29976.m000504	595	83.3	83.3	cinnamate 4-hydroxylase, putative
castor_bean_pep	29976.m000504	552	94.9	98.0	cinnamate 4-hydroxylase, putative
JAT_13201ests	--No_Hits--
KJC_r1	KJC_c04586	1764	99.8	99.8

A list of protein families, domains and functional sites (searches in InterPro)

IPR001128	Cytochrome P450
JcCA0130751.10				length: 306 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0004497	monooxygenase activity
Molecular Function	GO:0005506	iron ion binding
Molecular Function	GO:0009055	electron carrier activity
Molecular Function	GO:0020037	heme binding
Gene3D	G3DSA:1.10.630.10	no description	5e-40	23-306
HMMPanther	PTHR19383	CYTOCHROME	1.2e-212	6-306
HMMPfam	PF00067	p450	5.1e-47	34-304
superfamily	SSF48264	Cytochrome	1.5e-45	34-306
IPR002401	Cytochrome P450, E-class, group I
Molecular Function	GO:0004497	monooxygenase activity
Molecular Function	GO:0005506	iron ion binding
Molecular Function	GO:0020037	heme binding
Biological Process	GO:0055114	oxidation reduction
FPrintScan	PR00463	EP450I	8.2e-16	62-81 86-107 181-199 295-306
no_ID
HMMPanther	PTHR19383:SF33	CINNAMATE	1.2e-212	6-306