Jatropha Genome Database

JcCA0124671.10 (JcS_102931.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0124671
Scaffold:
JcS_102931 JcCA0124671(+) =JcCA0221041(+) =JcCA0273631(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SGN2_RICCO 366 97.2 99.4 (tr|B9SGN2) Rac gtpase, putative OS=Ricinus communis GN=RCOM_0554400 PE=3 SV=1
Arabidopsis_pep AT1G75840.1 348 84.2 90.8 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5); GTP binding / GTPase | chr1:28475964-28477377 FORWARD
soybean_pep Glyma12g33560.2 365 89.3 92.9  
Medicago_pep IMGA|Medtr2g132410.1 358 87.8 92.3 Ras GTPase chr02_pseudomolecule_IMGAG_V3 32003647-32002013 E EGN_Mt090430 20090702
grape_pep GSVIVT01020653001 367 90.3 93.4  
castor_bean_cds 29646.m001113 575 87.8 87.8 rac gtpase, putative
castor_bean_pep 29646.m001113 366 97.2 99.4 rac gtpase, putative
JAT_13201ests gi|268517537|gb|FM889248.1|FM889248 359 99.5 99.5 FM889248 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002854, mRNA sequence
KJC_r1 KJC_c00209 188 79.8 79.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0124671.10 length: 196 aa.
IPR001806 Ras GTPase
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 1.5e-37 7-28
30-46
47-69
109-122
155-177
IPR003577 Ras small GTPase, Ras type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00173 no description 1.3e-21 4-180
IPR003578 Small GTPase, Rho type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00174 no description 8.2e-113 9-180
ProfileScan PS51420 RHO 25.302 1-177
IPR003579 Ras small GTPase, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 no description 1.9e-26 7-180
IPR005225 Small GTP-binding protein
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 3.5e-33 4-175
IPR013753 Ras
HMMPfam PF00071 Ras 2.5e-52 8-178
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.7e-56 7-185
HMMPanther PTHR11708 RAS-RELATED 1.5e-147 12-196
HMMPanther PTHR11708:SF285RAS-RELATED PROTEIN 1.5e-147 12-196
Seg seg seg NA 180-192
superfamily SSF52540 P-loop 2.2e-54 2-183