Jatropha Genome Database

JcCA0116921.10 (JcS_106106.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0116921
Scaffold:
JcS_106106 JcCA0116921(+) =JcCA0068161(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SAW4_RICCO 341 96.5 98.8 (tr|B9SAW4) Aspartate ammonia lyase, putative OS=Ricinus communis GN=RCOM_1179670 PE=4 SV=1
Arabidopsis_pep AT5G50950.1 316 89.3 95.3 | Symbols: | fumarate hydratase, putative / fumarase, putative | chr5:20729687-20733476 FORWARD
soybean_pep Glyma10g02040.2 326 90.8 96.0  
Medicago_pep IMGA|Medtr1g107740.1 304 92.3 96.4 Fumarate lyase; Fumarate hydratase, class II chr01_pseudomolecule_IMGAG_V3 22807066-22813739 F EGN_Mt090430 20090702
grape_pep GSVIVT01028056001 301 91.1 96.4  
castor_bean_cds 29986.m001664 692 92.3 92.3 aspartate ammonia lyase, putative
castor_bean_pep 29986.m001664 341 96.5 98.8 aspartate ammonia lyase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0116921.10 length: 195 aa.
IPR000362 Fumarate lyase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
FPrintScan PR00149 FUMRATELYASE 2.2e-17 3-30
49-65
HMMPfam PF00206 Lyase_1 8.4e-30 2-74
IPR008948 L-Aspartase-like
Molecular Function GO:0003824 catalytic activity    
superfamily SSF48557 L-aspartase-like 1.2e-58 1-171
IPR018951 Fumarase C, C-terminal
Biological Process GO:0006099 tricarboxylic acid cycle    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF10415 FumaraseC_C 9.1e-13 140-170
IPR020557 Fumarate lyase, conserved site
Molecular Function GO:0003824 catalytic activity    
PatternScan PS00163 FUMARATE_LYASES NA 49-58
no_ID  
Gene3D G3DSA:1.10.40.30 no description 8.3e-08 140-168
Gene3D G3DSA:1.20.200.10 no description 2e-46 1-139
HMMPanther PTHR11444 ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE 1.2e-115 1-168
HMMPanther PTHR11444:SF1 ASPARTATE 1.2e-115 1-168