Jatropha Genome Database

JcCA0111271.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0111271
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl D7TLC8_VITVI 467 61.1 77.3 (tr|D7TLC8) Whole genome shotgun sequence of line PN40024, scaffold_82.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00036360001 PE=4 SV=1
Arabidopsis_pep AT5G23960.1 273 38.1 57.6 | Symbols: ATTPS21, TPS21 | TPS21 (TERPENE SYNTHASE 21); (-)-E-beta-caryophyllene synthase/ alpha-humulene synthase | chr5:8092969-8095128 FORWARD
soybean_pep Glyma12g16990.1 368 47.3 65.1  
Medicago_pep IMGA|Medtr5g081360.1 355 45.2 66.6 Terpene synthase-like; Terpenoid synthase chr05_pseudomolecule_IMGAG_V3 30559952-30563990 E EGN_Mt090430 20090702
grape_pep GSVIVT01036360001 467 61.1 77.3  
castor_bean_cds 29840.m000603 67.9 85.9 85.9 (+)-delta-cadinene synthase isozyme A, putative
castor_bean_pep 29840.m000603 424 54.4 71.1 (+)-delta-cadinene synthase isozyme A, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0111271.10 length: 406 aa.
IPR001906 Terpene synthase-like
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF01397 Terpene_synth 1.5e-55 7-166
IPR005630 Terpene synthase, metal-binding domain
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF03936 Terpene_synth_C 2.3e-68 196-389
IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
superfamily SSF48239 Terpenoid 6.1e-62 4-192
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 5.6e-88 170-405
superfamily SSF48576 Terpenoid 1.5e-85 192-405
no_ID  
Coil coil coiled-coil NA 55-76
Seg seg seg NA 281-289